Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs13092352 chr3:52969697 C/T 2.18E-14 254 30.93 34.57 1.17 KM Plot
SARC rs13100714 chr3:53074824 T/G 0 255 31.78 31.97 2.13 KM Plot
SARC rs13103909 chr4:42124362 A/G 3.6E-6 251 33.9 31.1 14.92 KM Plot
SARC rs13225086 chr7:134011411 C/T 7.74E-5 249 35.17 27.95 25.57 KM Plot
SARC rs13235296 chr7:134019192 A/G 1.68E-5 258 25.57 30.93 32.9 KM Plot
SARC rs13320044 chr3:53129183 G/A 0 254 32.35 27.4 2.13 KM Plot
SARC rs13339247 chr16:71604052 C/T 0 258 31.77 32.3 1.07 KM Plot
SARC rs13357088 chr5:914098 C/T 1.82E-11 258 32.35 29.9 3.1 KM Plot
SARC rs13423562 chr2:70196497 C/T 7.7E-8 255 32.8 31.93 10.83 KM Plot
SARC rs1385056 chr4:80238693 G/A 1.31E-13 255 33.48 27.37 3.58 KM Plot
SARC rs1390324 chr12:26085122 G/C 2.89E-6 256 33.9 27.25 16.17 KM Plot
SARC rs139115713 chr3:53000016 C/G 1.81E-14 257 30.93 35.37 1.17 KM Plot
SARC rs139138967 chr18:71830386 CTT/C 3.31E-5 254 31.57 32.13 6.43 KM Plot
SARC rs141810796 chr3:15539976 C/CCACA 6.59E-5 252 33.48 30.77 10.6 KM Plot
SARC rs142139627 chr5:74451811 A/C 9.98E-5 250 31.97 33.77 9.95 KM Plot